2014-04-29T10:20:50-07:00
Resource:ModelDB
ModelDB
Shepherd Lab
Yale University
Connecticut
USA
uncurated
http://senselab.med.yale.edu/modeldb/
A curated database of published models in the broad domain of computational neuroscience. ModelDB provides an accessible location for storing and efficiently retrieving computational neuroscience models. ModelDB is tightly coupled with NeuronDB. Models can be coded in any language for any environment. Model code can be viewed before downloading and browsers can be set to auto-launch the models.
ModelDB addresses the need for access to such models in order to evaluate their validity and extend their use. It can handle computational models expressed in any textual form, including procedural or declarative languages (e.g. C , XML dialects) and source code written for any simulation environment. The model source code doesn't even have to reside inside ModelDB; it just has to be available from some publicly accessible online repository or WWW site.
ModelDB is curated in order to maximize the scientific utility of its contents. The ideal model entry would contain "original" (author-written) source code, especially if it works and reproduces at least one figure from a published article. Original source code has tremendous value because it is what the authors used to generate the simulation results from which they derived their published insights and conclusions. High quality "third party" re-implementations of published models are also relevant, especially those involving models that are of wide interest.<br />
Category:Human Brain Project Grant 5PO1DC004732
nif-0000-00004
Resource:ModelDB
2014-03-15T00:00:00
15218350, 15055399, 8930855
Resource
Model Database
Model DB
Model-DB
Model_DB
Resource:SimToolDB
Resource:NeuronVisio
Resource:ModelRun
Resource:Integrated Manually Extracted Annotation
Resource:Integrated Models
Resource
Synonym
National Cancer Institute
National Institute of Neurological Disorders and Stroke
National Institute of Mental Health
Supporting Agency
SuperCategory
Resource:3DVC
Resource:NeuronDB
Resource:Biositemaps
Resource:NIF Data Federation
RelatedTo
PMID
ModifiedDate
Label
Axon
Neuromuscular junction
Ion channel
Chemical synapse
Gap junction
Electrical synapse
Simulator
Transmitter
Gene
Receptor
Current
Cell type
Computational model
Model
Neural network
Channel
Computer model
Simulation
Computational neuroscience model
Neuron
Network
Keywords
Yale University; Connecticut; USA
Is part of
Id
Software repository
Database
Has role
Grant
File:Modeldb.png
ExampleImage
Definition
DefiningCitation
CurationStatus
Acknowledgement requested
Availability
Address
Abbrev