2011-10-17T05:34:08-07:00
Resource:UM-BBD
UM-BBD, UM-BBD enzymeID, UM-BBD pathwayID, UM-BBD reactionID, UM-BBD ruleID
curated
http://umbbd.msi.umn.edu/
<br />
This database contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology.<br />
The reactions covered are studied for basic understanding of nature, biocatalysis leading to specialty chemical manufacture, and biodegradation of environmental pollutants. Individual reactions and metabolic pathways are presented with information on the starting and intermediate chemical compounds, the organisms that transform the compounds, the enzymes, and the genes. The present database has been successfully used to teach enzymology and use of biochemical Internet information resources to advanced undergraduate and graduate students, and is being expanded primarily with the help of such students.
In addition to reactions and pathways, this database also contains Biochemical Periodic Tables and a Pathway Prediction System.
* Search the UM-BBD for compound, enzyme, microorganism, pathway, or BT rule name; chemical formula; chemical structure; CAS Registry Number; or EC code.
* Go to Pathways and Metapathways in the UM-BBD
* Lists of 203 pathways; 1400 reactions; 1296 compounds; 916 enzymes; 510 microorganism entries; 245 biotransformation rules; 50 organic functional groups; 76 reactions of naphthalene 1,2-dioxygenase; 109 reactions of toluene dioxygenase; Graphical UM-BBD Overview; and Other Graphics (Metapathway and Pathway Maps and Reaction Mechanisms).
Category:NSF0543416
Category:DE-FG02-01ER63268
Category:R01GM56529
Category:NSF9630427
nif-0000-03607
Resource:UM-BBD
2011-07-21T00:00:00
19767608, 16381924
University of Minnesota Biocatalysis/Biodegradation Database
Biocatalysis/Biodegradation Database
Resource
Synonym
National Institutes of Health
(6th Framework ALARM project)
European Union
Lhasa Limited
United States Department of Energy
Minnesota Supercomputing Institute
National science foundation
Supporting Agency
PMID
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Label
Microorganism
Reaction
Metabolic pathways
Chemical
Biodegredation
Biocatalysis
Enzyme
Keywords
University of Minnesota; Minnesota; USA
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Data analysis service
Database
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Grant
File:UM-BBD.PNG
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