2011-10-05T22:26:25-07:00
Resource:MIPS FunCat
MIPS FunCat
uncurated
http://mips.helmholtz-muenchen.de/proj/funcatDB/
The Functional Catalogue is an annotation scheme for the functional description of proteins of prokaryotic and eukaryotic origin. Taking into account the broad and highly diverse spectrum of known protein functions, the FunCat consists of 28 main functional categories (or branches) that cover general fields like cellular transport, metabolism and cellular communication/signal transduction.
The main branches exhibit a hierarchical, tree like structure with up to six levels of increasing specificity. In total, the FunCat version 2.1 includes 1362 functional categories. This general concept was retained since the annotation of the Saccharomyces cerevisiae genome with only 4 revisions and later on also proved to be well suited for the annotation of genomes from different domains of life (Ruepp et al. 2004). The present and previous versions as well as a version mapping file of the FunCat and annotation data of our core projects can be downloaded via FTP.
The MIPS Functional Catalogue Database provides a search tool to browse and search the Functional Categories including the FunCat Number, description, EC number, GO number or keywords associated with the categories. All FunCat annotated proteins and the amount of Co-annotated-FunCats can be retrieved starting with a specific category in a selected organism. A statistical survey of the functional distribution of a given set of genes/entries, e. g. a set of genes with up-regulated expression under a certain condition can be retrieved.
Category:031U112C
Category:01SF9985
Category:QLRI-CT1999-01333
nlx_11495
Resource:MIPS FunCat
2010-09-21T00:00:00
15486203
MIPS Functional Catalogue
Functional Catalogue
FunCat
FunCatDB
Resource
Synonym
Eu-Framework 5)
HNB
(BFAM
European Commission
Federal Ministry of Education Science Research and Technology (BMBF)
Supporting Agency
PMID
ModifiedDate
Label
Resource:The Munich Information Center for Protein Sequences
Is part of
Id
Database
Has role
Grant
Definition
DefiningCitation
CurationStatus
Abbrev